BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D08SP1|AL428543
(134 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig121 140 6e-34
>3x_Contig121
Length = 884
Score = 140 bits (70), Expect = 6e-34
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 9 gcttggcaccgtcggtccaycccacgaggatgtccccgagaaggttgaaaaaattatgga 68
|||||||||||||||| | |||||||||||||||||||||||| || | |||||||
Sbjct: 505 gcttggcaccgtcggtaaatttgacgaggatgtccccgagaaggttgcaacacttatgga 564
Query: 69 taaattgggattgaaaagtggtgaattgttgaaaaagatgataagggaaagggatt 124
| ||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 565 tcaattgggattgaaaagtggtgaattgttgcaacagatgataagggaaagggatt 620
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1118
Number of Sequences: 1807
Number of extensions: 1118
Number of successful extensions: 107
Number of sequences better than 1.0e-20: 1
length of query: 134
length of database: 10,358,551
effective HSP length: 15
effective length of query: 119
effective length of database: 10,331,446
effective search space: 1229442074
effective search space used: 1229442074
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 49 (98.6 bits)